Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887363.1_cds_XP_016441677.1_37015
CDS Infomation

[gene=LOC107767270] [db_xref=GeneID:107767270] [protein=protein phosphatase 2C 57-like] [protein_id=XP_016441677.1] [location=join(47875..48200,48719..48847,48949..49051,49147..49257,49600..49679,49814..49867,50448..50564,50654..50708,50786..50818,50903..50949,51547..51670)] [gbkey=CDS]
Sequence

ATGGCCTTATCTAGTCCCTACTTGCAAAAAGTTCTTTTAAACAGGCTTTGCTGCAACTAT
GGCTACAAAAAGAATATCATAATAAAGGCTGGAGGAGGAGGTAGAGGTGGAGAGGGTAGA
GGAAGATGTTGCTCTGCTATTGCAATCAACGCACCAGCTCCTTTGACAAGTGTTTCTGGC
ATTAGATGGGGTTCAACACTAATCCAAGGGCCACGTGAAGAGATGGAAGATGATGCTGTG
ATAGTTCAATCTGATGATCTTGATGGCTTCACTTATGCTGCTGTTTTTGATGGCCATGCT
GGCTTCTCCTCTGTCAAGTTCCTTAGGGAGGAGCTGTATAAAGAATGTATTACAGCATTA
CAAGGCGGGCTGCTATTGGAAAAAAGGGACCTAAACGCAATCCAGAAGGCACTACAAGAA
GCTTTTGAAAATGCGGATAGAAAACTCTTGAACTGGCTTGAGAGTAGCGGGAAAGAAGAT
GAATCTGGTTCAACAGCTACTGTTCTATTTGTTGGGAATGACACATTGATCATTGCACAT
GTTGGAGATTCATCTGTGGTGTTGTCACGATCTGGAAAAATGGAGGTATTAACAAATGCA
CACAGGCCCTATGGAAGCAACAAGGTTTCTCTCCAAGAAATCAGAAGAATCAATGAAGCA
GGTGGATGGATTGTCAATGGAAGAATTTGTGGAGATATTTCAGTATCCCGTGCTTTTGGC
GATATGAGATTTAAGACAAAGAAGAATGAGATGCTGGAGAAAGGGATTGAAGAAGGCAGA
TGGAGTGAAAAGTTTGTTTCGCGGATTCAGTTCAAGGGAGACTTGGTTACAGCATCTCCA
GATGTTTTACAGGTGGCTCTTGGATCAGATACTGAATTTGTACTATTAGCATCTGATGGA
TTATGGGACTACATGAAAAGTGCTGAAGTAGTAGATTTTGTTAGGAACCAGCTTCGAGAG
CATGGAGATGTTCAGGTAGCTTGTGAAGCTCTTGCACGGACGGCCATGGACCGACGGACA
CAAGATAATGTTAGCATTGTCATAGCTGATTTGGGGAGAACGGACTGGCGAAATTTACCT
GTGCAGAAACAAAATATTGTGTTTGAACTAGGACAAGCTTTAATCACAATCAGTTTTGTG
TCACTTGGGATATGGCTGACTACCGTGATTTCCCCTTAG

Peptide Sequence

PEP ID

XP_016441677.1
PEP Infomation

PREDICTED: protein phosphatase 2C 57-like [Nicotiana tabacum]
Sequence

MALSSPYLQKVLLNRLCCNYGYKKNIIIKAGGGGRGGEGRGRCCSAIAINAPAPLTSVSG
IRWGSTLIQGPREEMEDDAVIVQSDDLDGFTYAAVFDGHAGFSSVKFLREELYKECITAL
QGGLLLEKRDLNAIQKALQEAFENADRKLLNWLESSGKEDESGSTATVLFVGNDTLIIAH
VGDSSVVLSRSGKMEVLTNAHRPYGSNKVSLQEIRRINEAGGWIVNGRICGDISVSRAFG
DMRFKTKKNEMLEKGIEEGRWSEKFVSRIQFKGDLVTASPDVLQVALGSDTEFVLLASDG
LWDYMKSAEVVDFVRNQLREHGDVQVACEALARTAMDRRTQDNVSIVIADLGRTDWRNLP
VQKQNIVFELGQALITISFVSLGIWLTTVISP

Transcript Sequence

Gene sequence data has not been registered.